2019:courses:kraenkel:spatial_ecology
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Table of Contents
Spatial Ecology - additional resources
Lecture
<WRAP left round todo 33%> Handouts will be available here at the day of the lecture. </WRAP>
Resources in the Web
- Diffusion and Fick's Law, a nice introductory video from the Stem concept videos from MIT and STUD.
Read more
- J.D. Murray: Mathematical Biology I & II (Springer, 2002)
- N.F. Britton: Essential Mathematical Biology ( Springer, 2003).
- R.S. Cantrell & C. Cosner: Spatial Ecology via Reaction-Diffusion Equations (Wiley, 2003).
- A. Okubo & S.A. Levin: Diffusion and Ecological Problems (Springer, 2001).
- P. Turchin: Quantitative Analysis of Movement (Sinauer, 1998)
- Skellam, J.G., 1951. Random dispersal in theoretical populations. Biometrika, 38: 196-218.
- Holmes, E.E., Lewis, M.A., Banks, J.E. and Veit, R.R., 1994. Partial differential equations in ecology: spatial interactions and population dynamics. Ecology, 75: 17-29.
- Spatial Ecology and Evolution, course held at the III Southern Summer School on Mathematical Biology
Pattern formation by reaction-diffusion
- Reaction-diffusion tutorial: nice introduction with videos
- Gray-Scott model: great site with codes, theory and results of a simple chemical reaction-diffusion that generates very complicated patterns. Also links to relevant papers on pattern generation by reaction-diffusion equations.
Cases
- Diffusion and home range parameters from rodent population measurements in Panama. Giuggioli et al. (2005). Bulletin of Mathematical Biology.
- Fonseca CR, Coutinho RM, Azevedo F, Berbert JM, Corso G, Kraenkel RA (2013) Modeling Habitat Split: Landscape and Life History Traits Determine Amphibian Extinction Thresholds. PLoS ONE 8(6): e66806.
- Law, R., Murrell, D. J., & Dieckmann, U. (2003). Population growth in space and time: spatial logistic equations. Ecology, 84(1), 252-262.
- Maciel, G.A. and Lutscher, F. (2013). How individual movement response to habitat edges affects population persistence and spatial spread. The American Naturalist, 182(1), pp.42-52. "Outstanding Ecological Theory Paper" awarded by the Ecological Society of America.
- Maciel, G. A., & Kraenkel, R. A. (2014). How population loss through habitat boundaries determines the dynamics of a predator–prey system. Ecological Complexity, 20, 33-42.
- Azevedo, F., Kraenkel, R. A., & da Silva, D. P. (2012). Competitive release and area effects. Ecological Complexity, 11, 154-159. Generalization of Skellam's critical pathc size model to two competing species.
2019/courses/kraenkel/spatial_ecology.1546569459.txt.gz · Last modified: 2024/01/09 18:45 (external edit)