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2014:courses:massol:phenotypic_models [2014/02/05 13:45] – massol2014:courses:massol:phenotypic_models [2024/01/09 18:45] (current) – external edit 127.0.0.1
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 ===== Phenotypic models ===== ===== Phenotypic models =====
 +
 +Lecture [[https://www.dropbox.com/s/zvfyg55dkpwyqbr/Lecture2v4.pdf]]
  
 === Relevant webpages === === Relevant webpages ===
 Josef Hofbauer's [[http://homepage.univie.ac.at/josef.hofbauer/]] Josef Hofbauer's [[http://homepage.univie.ac.at/josef.hofbauer/]]
 +
 Adaptive dynamics network at IIASA [[http://webarchive.iiasa.ac.at/Research/ADN/]] Adaptive dynamics network at IIASA [[http://webarchive.iiasa.ac.at/Research/ADN/]]
 +
 +Odo Diekmann's beginners guide to adaptive dynamics [[http://www.environnement.ens.fr/IMG/file/DavidPDF/DYAD/OdoDiekmann2004beginnersguide.pdf]]
  
 === Further reading === === Further reading ===
-Akçay E. & Roughgarden J. (2010). The evolution of payoff matrices: providing incentives to cooperate. Proc R Soc Lond B Biol Sci, 278.+Akçay E. & Roughgarden J. (2011). The evolution of payoff matrices: providing incentives to cooperate. Proc R Soc Lond B Biol Sci, 278. [[http://www.princeton.edu/~eakcay/publications_files/akcay%26roughgarden2011.pdf]]
  
-Arnold S.J. (1992). Constraints on phenotypic evolution. Am Nat, 140, S85-S107.+Arnold S.J. (1992). Constraints on phenotypic evolution. Am Nat, 140, S85-S107. [[http://people.oregonstate.edu/~arnoldst/pdf_files/Arnold%201992.pdf]]
  
-Bishop D.T. & Cannings C. (1976). Models of animal conflict. Adv Appl Proba, 8, 616-621.+Bishop D.T. & Cannings C. (1976). Models of animal conflict. Adv Appl Proba, 8, 616-621. [[http://www.jstor.org/stable/pdfplus/1425917.pdf]]
  
-Bishop D.T. & Cannings C. (1978). A generalized war of attrition. J Theor Biol, 70, 85-124.+Bishop D.T. & Cannings C. (1978). A generalized war of attrition. J Theor Biol, 70, 85-124. [[http://www.sciencedirect.com/science/article/pii/0022519378903041#]]
  
-Bulmer M.G. (1989). Maintenance of genetic variability by mutation–selection balance: a child's guide through the jungle. Genome, 31, 761-767.+Bulmer M.G. (1989). Maintenance of genetic variability by mutation–selection balance: a child's guide through the jungle. Genome, 31, 761-767. [[http://www.nrcresearchpress.com/doi/abs/10.1139/g89-135?journalCode=gen]]
  
-Bürger R. & Lynch M. (1995). Evolution and extinction in a changing environment: a quantitative genetic analysis. Evolution, 49, 151-163.+Bürger R. & Lynch M. (1995). Evolution and extinction in a changing environment: a quantitative genetic analysis. Evolution, 49, 151-163. [[http://www.indiana.edu/~lynchlab/PDF/Lynch64.pdf]]
  
-Champagnat N. (2006). A microscopic interpretation for adaptive dynamics trait substitution sequence models. Stochastic Processes and their Applications, 116, 1127-1160.+Champagnat N. (2006). A microscopic interpretation for adaptive dynamics trait substitution sequence models. Stochastic Processes and their Applications, 116, 1127-1160. [[http://www.iecn.u-nancy.fr/~champagn/Champagnat_Micro_P727.pdf]]
  
-Champagnat N., Ferrière R. & Ben Arous G. (2002). The canonical equation of adaptive dynamics: a mathematical view. Selection, 2, 73-83.+Champagnat N., Ferrière R. & Ben Arous G. (2002). The canonical equation of adaptive dynamics: a mathematical view. Selection, 2, 73-83. [[http://www.mabs.at/rueffler/files/Champagnat01Selection.pdf]]
  
-Chevin L.-M. (2013). Genetic constraints on adaptation to a changing environment. Evolution, 67, 708-721.+Chevin L.-M. (2013). Genetic constraints on adaptation to a changing environment. Evolution, 67, 708-721. [[http://webpages.icav.up.pt/fabulousfabalis/1%20Population%20Genetics/Chevin%202012%20Constraints%20on%20adaptation.pdf]]
  
-Dieckmann U. & Doebeli M. (1999). On the origin of species by sympatric speciation. Nature, 400, 354-357.+Dieckmann U. & Doebeli M. (1999). On the origin of species by sympatric speciation. Nature, 400, 354-357. [[http://bioinformatics.bio.uu.nl/BINF/References_for_exercises/dieckmann.pdf]]
  
-Dieckmann U. & Law R. (1996). The dynamical theory of coevolution: A derivation from stochastic ecological processes. J Math Biol, 34, 579-612.+Dieckmann U. & Law R. (1996). The dynamical theory of coevolution: A derivation from stochastic ecological processes. J Math Biol, 34, 579-612. [[http://folk.uib.no/nfiof/NMA/Reading%20list/DieckmannLaw1996.pdf]]
  
-Eshel I. (1983). Evolutionary and continuous stability. J Theor Biol, 103, 99-111.+Eshel I. (1983). Evolutionary and continuous stability. J Theor Biol, 103, 99-111. [[http://www.sciencedirect.com/science/article/pii/0022519383902011]]
  
 Falconer D.S. & Mackay T.F.C. (1996). Introduction to quantitative genetics. 4th edn. Falconer D.S. & Mackay T.F.C. (1996). Introduction to quantitative genetics. 4th edn.
  
-Frank S.A. (1995). George Price’s contributions to evolutionary genetics. J Theor Biol, 175, 373-388.+Frank S.A. (1995). George Price’s contributions to evolutionary genetics. J Theor Biol, 175, 373-388. [[http://stevefrank.org/reprints-pdf/95JTB-Price.pdf]]
  
-Geritz S.A.H., Kisdi E., Meszena G. & Metz J.A.J. (1998). Evolutionarily singular strategies and the adaptive growth and branching of the evolutionary tree. Evol Ecol, 12, 35-57.+Geritz S.A.H., Kisdi E., Meszena G. & Metz J.A.J. (1998). Evolutionarily singular strategies and the adaptive growth and branching of the evolutionary tree. Evol Ecol, 12, 35-57. [[http://home.deib.polimi.it/dercole/ad/Evol_Ecol_1998.pdf]]
  
-Hofbauer J. & Sigmund K. (1990). Adaptive dynamics and evolutionary stability. Appl Math Lett, 3, 75-79.+Hofbauer J. & Sigmund K. (1990). Adaptive dynamics and evolutionary stability. Appl Math Lett, 3, 75-79. [[http://homepage.univie.ac.at/karl.sigmund/adaptivedynamics.pdf]]
  
-Lande R. (1979). Quantitative genetic analysis of multivariate evolution, applied to brain: body size allometry. Evolution, 33, 402-416.+Lande R. (1979). Quantitative genetic analysis of multivariate evolution, applied to brain: body size allometry. Evolution, 33, 402-416. [[http://transgenerational.zoo.cam.ac.uk/sites/default/files/Lande%201979%20Evolution.pdf]]
  
-Lande R. (1980). The genetic covariance between characters maintained by pleiotropic mutations. Genetics, 94, 203-215.+Lande R. (1980). The genetic covariance between characters maintained by pleiotropic mutations. Genetics, 94, 203-215. [[http://www.genetics.org/content/94/1/203.full.pdf+html]]
  
 Lynch M. & Walsh B. (1998). Genetics and analysis of quantitative traits. Sinauer (Sunderland, Mass.). Lynch M. & Walsh B. (1998). Genetics and analysis of quantitative traits. Sinauer (Sunderland, Mass.).
  
-Maynard Smith J. & Price G.R. (1973). The logic of animal conflict. Nature, 246, 15-18.+Maynard Smith J. & Price G.R. (1973). The logic of animal conflict. Nature, 246, 15-18. [[http://pi.unl.edu/~bdeng1/Teaching/math439/readingarticles/Mayn73.pdf]]
  
-Nash Jr J.F. (1950). The bargaining problem. Econometrica, 155-162.+Nash Jr J.F. (1950). The bargaining problem. Econometrica, 155-162. [[http://www.eecs.harvard.edu/cs286r/courses/spring02/papers/nash50a.pdf]]
  
-Nowak M. & Sigmund K. (1990). The evolution of stochastic strategies in the prisoner's dilemma. Acta Appl Math, 20, 247-265.+Nowak M. & Sigmund K. (1990). The evolution of stochastic strategies in the prisoner's dilemma. Acta Appl Math, 20, 247-265. [[http://download.springer.com/static/pdf/493/art%253A10.1007%252FBF00049570.pdf?auth66=1391781662_0cfe396cdf92e64b7aab8e28430a3406&ext=.pdf]]
  
-Nowak M.A. & Sigmund K. (2004). Evolutionary dynamics of biological games. Science, 303, 793-799.+Nowak M.A. & Sigmund K. (2004). Evolutionary dynamics of biological games. Science, 303, 793-799. [[http://homepage.univie.ac.at/karl.sigmund/Science04.pdf]]
  
-Schuster P. & Sigmund K. (1983). Replicator dynamics. J Theor Biol, 100, 533-538.+Schuster P. & Sigmund K. (1983). Replicator dynamics. J Theor Biol, 100, 533-538. [[http://www.sciencedirect.com/science/article/pii/0022519383904459]]
  
-Sinervo B. & Lively C.M. (1996). The rock-paper-scissors game and the evolution of alternative male strategies. Nature, 380, 240-243.+Sinervo B. & Lively C.M. (1996). The rock-paper-scissors game and the evolution of alternative male strategies. Nature, 380, 240-243. [[http://www.indiana.edu/~curtweb/L567/readings/Sinervo&Lively1996.pdf]]
  
-Slatkin M. (1980). Ecological character displacement. Ecology, 61, 163-177.+Slatkin M. (1980). Ecological character displacement. Ecology, 61, 163-177. [[http://www.jstor.org/stable/pdfplus/1937166.pdf]]
  
-Turelli M. & Barton N.H. (1994). Genetic and statistical analyses of strong selection on polygenic traits: what, me normal? Genetics, 138, 913-941.+Turelli M. & Barton N.H. (1994). Genetic and statistical analyses of strong selection on polygenic traits: what, me normal? Genetics, 138, 913-941. [[http://www.genetics.org/content/138/3/913.full.pdf]]
  
2014/courses/massol/phenotypic_models.1391607932.txt.gz · Last modified: 2024/01/09 18:45 (external edit)