Diferenças

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--- roteiros:pacotesr [2015/03/22 23:20] – leo
+++ roteiros:pacotesr [2024/01/12 10:40] (atual) – edição externa 127.0.0.1
@@ Linha 1: / Linha 1: @@
 ====== Pacotes do R ======
+{{:roteiros:rlogo.jpg  |}}
 Abaixo estão alguns pacotes úteis para as análises apresentadas na disciplina:
+-------------
 ===== Unmarked =====
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   * [[http://www.jstatsoft.org/v43/i10|Fiske & Chandler 2001]]
+-------------
 =====RMark=====
 Para executar o MARK a partir do R:
-  * [[http://www.phidot.org/software/mark/rmark/]]
+  * [[http://www.phidot.org/software/mark/rmark/|Site]]
+-------------
 ===== Rcapture =====
@@ Linha 19: / Linha 26: @@
   * [[http://www.jstatsoft.org/v19/i05/paper|Baillargeon & Rivest 2007]]
+-------------
+===== marked =====
+Outro pacote com análises de marcação-recaptura. Descrição no artigo abaixo:
+  * [[http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12065/abstract;jsessionid=EE80BBBC8A96299C121C744EBDF25E85.f03t03|Laake et al. 2013]]
+-------------
+===== mra =====
+Ainda outro pacote para análises de marcação-recaptura.
+  * [[http://dssm.unipa.it/CRAN/web/packages/mra/mra.pdf|PDF com descrição]]
+-------------
 ===== secr =====
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   * [[http://www.otago.ac.nz/density/pdfs/secr-overview.pdf|Efford Overview SECR]]
+-------------
 ===== wiqid =====
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   * [[http://www.mikemeredith.net/|Blog do autor]]
+-------------
 ===== stocc =====
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 Modelos de ocupação espacialmente explícitos:
-  * [[http://finzi.psych.upenn.edu/R/library/stocc/html/stocc-package.html]]
+  * [[http://cran.r-project.org/web/packages/stocc/stocc.pdf|PDF com descrição]]
+-------------
 ===== detect =====
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   * [[http://dcr.r-forge.r-project.org/qpad/QPAD_SupportingInfo.pdf]]
-  * Lele, S.R., Moreno, M. and Bayne, E. 2011. Dealing with detection error in site occupancy surveys: What can we do with a single survey? Journal of Plant Ecology, 5(1), 22–31.
+  * Lele, S.R., Moreno, M. & Bayne, E. 2011. Dealing with detection error in site occupancy surveys: What can we do with a single survey? //Journal of Plant Ecology//, 5(1), 22–31.
-  * Solymos, P., Lele, S. R and Bayne, E. 2011. Conditional likelihood approach for analyzing single visit abundance survey data in the presence of zero inflation and detection error. Environmetrics, 23, 197–205.
+  * Solymos, P., Lele, S.R & Bayne, E. 2011. Conditional likelihood approach for analyzing single visit abundance survey data in the presence of zero inflation and detection error. //Environmetrics//, 23, 197–205.
-  * Solymos, P., Matsuoka, S. M., Bayne, E. M., Lele, S. R., Fontaine, P., Cumming, S. G., Stralberg, D., Schmiegelow, F. K. A. & Song, S. J., 2013. Calibrating indices of avian density from non-standardized survey data: making the most of a messy situation. Methods in Ecology and Evolution, 4, 1047–1058.
+  * Solymos, P., Matsuoka, S.M., Bayne, E.M., Lele, S.R., Fontaine, P., Cumming, S.G., Stralberg, D., Schmiegelow, F.K.A. & Song, S.J. 2013. Calibrating indices of avian density from non-standardized survey data: making the most of a messy situation. //Methods in Ecology and Evolution//, 4, 1047–1058.
+-------------
 ===== WiSP =====
@@ Linha 57: / Linha 90: @@
   * [[http://www.ruwpa.st-and.ac.uk/estimating.abundance/WiSP| Site]]
+  * Borchers, D.L., Buckland, S.T. & Zucchini, W. 2010. //Estimating Animal Abundance: closed populations//. Springer-Verlag, London.